refactor(core): move shared runtime into workspace package
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// Passive-pull indexing orchestration for the Core package.
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import { DB_PATH, openDb, openReadDb, openWriterLeaseDb, rebuildMemoryFts } from './db.mjs';
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import {
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CLAUDE_DIR, CODEX_DIR, PROJECTS_DIR, fs, path, isDir, readLines,
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inferProjectPath, discoverJsonlFiles, discoverCodexJsonlFiles, codexDbId, readCodexGuardianThreadInfo,
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} from './parsing.mjs';
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import { persist } from './persist.ts';
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import { nodeSqliteTransactionAdapter } from './tx.ts';
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import { acquireWriterLease, writerLockPathFor } from './writer-lease.ts';
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import { runRetryableWriteTransaction, isBeginBusyFailure, hasUnusableTransaction } from './write-coordinator.ts';
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import { parse as claudeParse } from './providers/claude.ts';
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import { parse as codexParse } from './providers/codex.ts';
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const HISTORY_PATH = path.join(CLAUDE_DIR, 'history.jsonl');
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function needsReindex(db, fp) {
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const mt = fs.statSync(fp).mtimeMs;
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const row = db.prepare('SELECT mtime, lines_processed FROM index_state WHERE jsonl_path = ?').get(fp);
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if (!row) return { needed: true, skip: 0 };
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return mt > row.mtime ? { needed: true, skip: row.lines_processed } : { needed: false, skip: 0 };
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}
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function indexCodexSessionIndex(db) {
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const indexPath = path.join(CODEX_DIR, 'session_index.jsonl');
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if (!fs.existsSync(indexPath)) return;
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readLines(indexPath, (line) => {
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let item;
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try {
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item = JSON.parse(line);
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} catch (e) {
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process.stderr.write(`Warning: malformed Codex session index line: ${e.message}\n`);
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return;
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}
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if (!item.id || !item.thread_name) return;
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db.prepare('UPDATE sessions SET title=COALESCE(title, ?), ended_at=COALESCE(ended_at, ?) WHERE id=? AND source=?')
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.run(item.thread_name, item.updated_at || null, codexDbId(item.id), 'codex');
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});
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}
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function refreshSessionProjectPaths(db) {
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const sessions = db.prepare('SELECT id, project FROM sessions').all();
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const cwdStmt = db.prepare(`
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SELECT cwd
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FROM messages
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WHERE session_id = ? AND cwd IS NOT NULL AND cwd != ''
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ORDER BY timestamp IS NULL, timestamp
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`);
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const update = db.prepare('UPDATE sessions SET project_path = ? WHERE id = ?');
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for (const session of sessions) {
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const cwds = cwdStmt.all(session.id).map(row => row.cwd);
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const projectPath = inferProjectPath(session.project, cwds);
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if (projectPath) update.run(projectPath, session.id);
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}
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}
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function indexSubagentMeta(db, fi) {
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if (!fi.isSubagent) return;
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const mp = fi.path.replace('.jsonl', '.meta.json');
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if (!fs.existsSync(mp)) return;
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let meta;
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try {
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meta = JSON.parse(fs.readFileSync(mp, 'utf8'));
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} catch (e) {
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process.stderr.write(`Warning: failed to read subagent meta ${mp}: ${e.message}\n`);
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return;
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}
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const tok = db.prepare('SELECT COALESCE(SUM(input_tokens),0)+COALESCE(SUM(output_tokens),0) as t FROM messages WHERE agent_id=?').get(fi.agentId);
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const ts = db.prepare('SELECT MIN(timestamp) as t0, MAX(timestamp) as t1 FROM messages WHERE agent_id=?').get(fi.agentId);
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const dur = ts?.t0 && ts?.t1 ? new Date(ts.t1).getTime() - new Date(ts.t0).getTime() : null;
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if (fi.workflowRunId) {
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db.prepare('INSERT OR REPLACE INTO workflow_agents (agent_id,run_id,session_id,agent_type,description) VALUES(?,?,?,?,?)').run(fi.agentId, fi.workflowRunId, fi.sessionId, meta.agentType||null, meta.description||null);
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} else {
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db.prepare('INSERT OR REPLACE INTO subagents VALUES(?,?,?,?,?,?,?)').run(fi.agentId, fi.sessionId, meta.toolUseId||null, meta.agentType||null, meta.description||null, dur, tok?.t||0);
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}
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}
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function indexWorkflows(db) {
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if (!fs.existsSync(PROJECTS_DIR)) return;
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let projects;
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try { projects = fs.readdirSync(PROJECTS_DIR); } catch { return; }
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for (const proj of projects) {
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const pp = path.join(PROJECTS_DIR, proj);
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if (!isDir(pp)) continue;
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let entries;
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try { entries = fs.readdirSync(pp); } catch { continue; }
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for (const sd of entries) {
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const wd = path.join(pp, sd, 'workflows');
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if (!isDir(wd)) continue;
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let wfFiles;
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try { wfFiles = fs.readdirSync(wd); } catch { continue; }
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for (const f of wfFiles) {
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if (!f.endsWith('.json')) continue;
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let wf;
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try {
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wf = JSON.parse(fs.readFileSync(path.join(wd, f), 'utf8'));
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} catch (e) {
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process.stderr.write(`Warning: failed to read workflow ${f}: ${e.message}\n`);
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continue;
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}
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if (!wf.runId) continue;
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const ac = db.prepare('SELECT COUNT(*) as c FROM workflow_agents WHERE run_id=?').get(wf.runId);
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db.prepare('INSERT OR REPLACE INTO workflows (run_id,session_id,task_id,script,result_json,timestamp,agent_count,duration_ms,total_tokens,status,workflow_name) VALUES(?,?,?,?,?,?,?,?,?,?,?)').run(
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wf.runId, sd, wf.taskId||null, wf.script||null,
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wf.result ? JSON.stringify(wf.result) : null, wf.timestamp||null, ac?.c||0,
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wf.durationMs||null, wf.totalTokens||null, wf.status||null, wf.workflowName||null);
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const progress = wf.workflowProgress || [];
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for (const item of progress) {
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if (item.type !== 'workflow_agent' || !item.agentId) continue;
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db.prepare('UPDATE workflow_agents SET phase=?, label=?, model=?, state=?, duration_ms=?, tokens=?, tool_calls=? WHERE agent_id=?').run(
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item.phaseTitle||null, item.label||null, item.model||null, item.state||null,
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item.durationMs||null, item.tokens||null, item.toolCalls||null, 'agent-' + item.agentId);
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}
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}
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}
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}
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}
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function indexHistory(db) {
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if (!fs.existsSync(HISTORY_PATH)) return;
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readLines(HISTORY_PATH, (line) => {
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let item;
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try {
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item = JSON.parse(line);
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} catch (e) {
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process.stderr.write(`Warning: malformed history line: ${e.message}\n`);
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return;
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}
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if (item.sessionId && item.title) db.prepare('UPDATE sessions SET title=? WHERE id=? AND title IS NULL').run(item.title, item.sessionId);
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});
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}
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const BUILD_DEBOUNCE_MS = 30000;
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const APP_HEARTBEAT_FRESH_MS = 60000;
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function shouldSkipBuild(db, { now = Date.now(), ignoreRecentBuild = false } = {}) {
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const appHeartbeat = db.prepare("SELECT mtime FROM index_state WHERE jsonl_path='__app_heartbeat__'").get();
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if (appHeartbeat && now - appHeartbeat.mtime < APP_HEARTBEAT_FRESH_MS) {
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return { skip: true, reason: 'daemon_active' };
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}
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if (!ignoreRecentBuild) {
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const last = db.prepare("SELECT mtime FROM index_state WHERE jsonl_path='__last_build__'").get();
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if (last && now - last.mtime < BUILD_DEBOUNCE_MS) {
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return { skip: true, reason: 'recent_build' };
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}
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}
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return { skip: false };
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}
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function isMissingIndexStateTable(error) {
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const message = error instanceof Error ? error.message : String(error);
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return /no such table:\s*(?:main\.)?index_state\b/i.test(message);
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}
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function inspectBuildOwnership({ force = false } = {}) {
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if (!fs.existsSync(DB_PATH)) return { skip: false };
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const db = openReadDb();
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try {
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return shouldSkipBuild(db, { ignoreRecentBuild: force });
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} catch (error) {
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// A missing table means the write path must initialize a new/legacy index.
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// Any other read failure leaves daemon ownership unknown, so fail closed.
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if (isMissingIndexStateTable(error)) return { skip: false };
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throw error;
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} finally {
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db.close();
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}
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}
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// A one-shot record stream that retracts a session, for routing guardian sweeps
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// through persist (the single db writer) instead of deleting rows directly.
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function* guardianDelete(sessionId) {
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yield { kind: 'delete-session', sessionId };
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return null;
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}
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function buildIndex({ force = false } = {}) {
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const ownership = inspectBuildOwnership({ force });
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if (ownership.skip) return ownership;
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const lease = acquireWriterLease({
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lockPath: writerLockPathFor(DB_PATH),
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openDb: openWriterLeaseDb,
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});
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if (!lease) return { skip: true, reason: 'writer_busy' };
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try {
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// Ownership may change between the first read and lease acquisition.
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const ownershipAfterLease = inspectBuildOwnership({ force });
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if (ownershipAfterLease.skip) return ownershipAfterLease;
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const db = openDb();
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const txDb = nodeSqliteTransactionAdapter(db);
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const skippedFiles = [];
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try {
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try {
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if (force) {
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runRetryableWriteTransaction(txDb, () => {
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db.prepare("DELETE FROM index_state WHERE jsonl_path != '__last_build__'").run();
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// Clearing index_state alone re-indexes existing files but leaves rows for
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// files that no longer exist on disk (stale sessions accumulate). A force
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// build is a clean rebuild: drop every derived table, then re-index from the
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// current files. `memories` is the durable, human-approved layer and is never
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// cleared; messages_fts is repopulated by the 'rebuild' command in finalize.
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for (const table of ['messages', 'tool_calls', 'tool_results', 'sessions', 'summaries', 'subagents', 'workflows', 'workflow_agents']) {
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db.prepare(`DELETE FROM ${table}`).run();
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}
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}, { label: 'force-cleanup' });
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}
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} catch (error) {
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if (isBeginBusyFailure(error)) {
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return { skip: true, reason: 'database_busy', skipped: skippedFiles.length, skippedFiles };
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}
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throw error;
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}
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const files = [
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...discoverJsonlFiles(),
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...discoverCodexJsonlFiles(),
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];
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for (const f of files) {
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try {
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runRetryableWriteTransaction(txDb, () => {
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if (f.source === 'codex') {
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// Codex goes through the pure adapter + shared persist (docs/adr/0001),
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// full-reparse (countMode 'total') when the file changed. An unchanged
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// file is not reparsed, but is still swept for stale guardian rows: a
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// guardian/auto-review thread must never linger in the index, even if it
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// was indexed before guardian detection removed it.
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const { needed } = needsReindex(db, f.path);
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if (needed) {
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persist(db, { key: f.path, sessionId: '' }, codexParse({ key: f.path, sessionId: '' }, null));
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} else {
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const guardian = readCodexGuardianThreadInfo(f.path);
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if (guardian) {
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persist(db, { key: f.path, sessionId: '' }, guardianDelete(codexDbId(guardian.threadRawId)));
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}
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}
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} else {
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// Claude transcripts now go through the pure adapter + shared persist
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// (docs/adr/0001). needsReindex keeps the "skip unchanged file" fast path;
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// the cursor's line count drives incremental resume inside parse().
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const { needed, skip } = needsReindex(db, f.path);
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if (needed) {
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const unit = { key: f.path, sessionId: f.sessionId, project: f.project, isSubagent: f.isSubagent, agentId: f.agentId };
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persist(db, unit, claudeParse(unit, skip > 0 ? `0:${skip}` : null));
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}
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indexSubagentMeta(db, f);
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}
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}, { label: `file:${f.path}` });
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} catch (e) {
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if (isBeginBusyFailure(e)) {
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return { skip: true, reason: 'database_busy', skipped: skippedFiles.length, skippedFiles };
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}
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if (hasUnusableTransaction(e)) throw e;
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// A per-file failure is skippable: log and move on.
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skippedFiles.push({ path: f.path, error: e.message, diagnostics: e.obelisk });
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process.stderr.write(`Warning: failed to index ${f.path}: ${e.message}\n`);
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}
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}
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// Finalize is one transaction and is NOT swallowed: a finalize failure fails
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// the build (a half-finalized index would be inconsistent).
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try {
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runRetryableWriteTransaction(txDb, () => {
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indexWorkflows(db);
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refreshSessionProjectPaths(db);
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indexHistory(db);
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indexCodexSessionIndex(db);
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db.exec("INSERT INTO messages_fts(messages_fts) VALUES('rebuild')");
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rebuildMemoryFts(db);
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db.prepare("INSERT OR REPLACE INTO index_state (jsonl_path, mtime, lines_processed) VALUES ('__last_build__', ?, 0)").run(Date.now());
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}, { label: 'finalize' });
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} catch (error) {
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if (isBeginBusyFailure(error)) {
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return { skip: true, reason: 'database_busy', skipped: skippedFiles.length, skippedFiles };
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}
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throw error;
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}
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return { skip: false, skipped: skippedFiles.length, skippedFiles };
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} finally {
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db.close();
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}
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} finally {
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lease.release();
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}
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}
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export { buildIndex, inferProjectPath, refreshSessionProjectPaths, shouldSkipBuild };
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