refactor(core): finish TypeScript workspace migration

references/api-reference.md

@@ -1,7 +1,7 @@
 # Obelisk -- Helper API Reference
 
-Detailed reference for globals available inside `runtime.mjs --query` and
-`runtime.mjs --attune` scripts.
+Detailed reference for globals available inside `runtime.js --query` and
+`runtime.js --attune` scripts.
 
 - Use `references/schema.md` for raw SQL table/field/join checks.
 - Use `references/query-patterns.md` for copyable retrieval plans.
@@ -16,7 +16,7 @@ memory mutation helpers.
 
 ### Read Helpers
 
-These globals are available only in `runtime.mjs --query` scripts:
+These globals are available only in `runtime.js --query` scripts:
 
 ```js
 sql, search, context, trace, thread, raw,
@@ -31,7 +31,7 @@ helpers is treated as `sessionId`; passing a number is treated as `limit`.
 
 ### Mutation Helpers
 
-These globals are available only in `runtime.mjs --attune` scripts:
+These globals are available only in `runtime.js --attune` scripts:
 
 ```js
 remember, forget
@@ -413,7 +413,7 @@ not a counting primitive.
 #### `remember(record)`
 
 Register a human-approved markdown memory file. Available only in
-`runtime.mjs --attune` scripts.
+`runtime.js --attune` scripts.
 
 | Param | Type | Description |
 | --- | --- | --- |
@@ -439,7 +439,7 @@ Returns:
 #### `forget(record)`
 
 Archive a human-approved memory record. Available only in
-`runtime.mjs --attune` scripts.
+`runtime.js --attune` scripts.
 
 | Param | Type | Description |
 | --- | --- | --- |

references/query-patterns.md

@@ -1,6 +1,6 @@
 # Obelisk Query Patterns
 
-These are copyable CodeAct patterns for `runtime.mjs --query` scripts plus
+These are copyable CodeAct patterns for `runtime.js --query` scripts plus
 `--attune` memory mutation patterns. They are not new APIs. Adapt them to the
 user's scope and return compact evidence.
 
@@ -179,7 +179,7 @@ Use this only after the user approves writing memory and the markdown file
 already exists. `remember()` validates the file and stores a normalized absolute
 path, so keep the script small and return the registered record.
 
-Run this script with `runtime.mjs --attune <script>`. The `--attune` runtime
+Run this script with `runtime.js --attune <script>`. The `--attune` runtime
 exposes only `remember()` and `forget()`, not retrieval helpers.
 
 ```js
@@ -204,7 +204,7 @@ the exact memory ID in a normal `--query` script first. If one candidate clearly
 matches the user's request, that request is approval to archive it; if several
 candidates match, ask which one to forget.
 
-Run the mutation with `runtime.mjs --attune <script>`:
+Run the mutation with `runtime.js --attune <script>`:
 
 ```js
 return forget({